BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G04SP1|AL430278
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1370 1801 0.0
>3x_Contig1370
Length = 5848
Score = 1801 bits (908), Expect = 0.0
Identities = 916/918 (99%), Gaps = 1/918 (0%)
Strand = Plus / Plus
Query: 1 aagtgtgtcaa-aatgagaagatcaaggtttttatatacgtaccaaaacaagtgtttggc 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 aagtgtgtcaacaatgagaagatcaaggtttttatatacgtaccaaaacaagtgtttggc 1554
Query: 60 atcaaacagctgagaaaattcaacattgatatctctgttgtttctagctcgctgaattgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atcaaacagctgagaaaattcaacattgatatctctgttgtttctagctcgctgaattgg 1614
Query: 120 aagtagtagggctttgctaagtgcgctctaaagggtttttgtgcgtacaagtaaatatgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 aagtagtagggctttgctaagtgcgctctaaagggtttttgtgcgtacaagtaaatatgg 1674
Query: 180 attacattttcaaatcgatatctaactttcaattgccttttactaccgatggtgtatctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 attacattttcaaatcgatatctaactttcaattgccttttactaccgatggtgtatctg 1734
Query: 240 ttgtgaatatgccatttggtacgctggaaagtggaaccaggaaatcagattcattacctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 ttgtgaatatgccatttggtacgctggaaagtggaaccaggaaatcagattcattacctg 1794
Query: 300 ttaccattcatacgtataaaactgaccaagtaccagctgtttttttaaagaaccatgttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 ttaccattcatacgtataaaactgaccaagtaccagctgtttttttaaagaaccatgttt 1854
Query: 360 tgaaatgtaagatccttaagcttccgggtctagcgaaagtattagatgtcattgaaccat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 tgaaatgtaagatccttaagcttccgggtctagcgaaagtattagatgtcattgaaccat 1914
Query: 420 ccacagataaagtctacatcatcaccgaaagaattactgctcttaactcattggattatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 ccacagataaagtctacatcatcaccgaaagaattactgctcttaactcattggattatt 1974
Query: 480 ttaacttcaatgaaaatgctttgaaacttggtatctatgamatagcactgacgttgaacg 539
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1975 ttaacttcaatgaaaatgctttgaaacttggtatctatgaaatagcactgacgttgaacg 2034
Query: 540 ttttacatcaacaaggcaagtcacttttcggtgcattgtgtttaggtaatgtctatgtca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 ttttacatcaacaaggcaagtcacttttcggtgcattgtgtttaggtaatgtctatgtca 2094
Query: 600 acagtaaaggtgaatgggtattatatgcattggagctatcgaccagcttgaacgatacaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 acagtaaaggtgaatgggtattatatgcattggagctatcgaccagcttgaacgatacaa 2154
Query: 660 accatttcacgtccaatatccagacctataacgatgttgtgaggggctatgacgattggc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2155 accatttcacgtccaatatccagacctataacgatgttgtgaggggctatgacgattggc 2214
Query: 720 agttgggaaatgggtcagcttcaaacattgactccatacaactggcgaactttttcaata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2215 agttgggaaatgggtcagcttcaaacattgactccatacaactggcgaactttttcaata 2274
Query: 780 aacttttaacaaatagaatatcttccagctggaagccagtcatatcacagcttgcaaagg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2275 aacttttaacaaatagaatatcttccagctggaagccagtcatatcacagcttgcaaagg 2334
Query: 840 gtcaaccaggtgctattggtaagcttatcagcaaaatgcagactgatgcagaaaatcctt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2335 gtcaaccaggtgctattggtaagcttatcagcaaaatgcagactgatgcagaaaatcctt 2394
Query: 900 tgatatccatatacgata 917
||||||||||||||||||
Sbjct: 2395 tgatatccatatacgata 2412
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7097
Number of Sequences: 1807
Number of extensions: 7097
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)